Staphylococcus aureus
Isolate HQ 16S/23S 12 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus; x__Staphylococcus aureus subsp. aureus MRGR3
NCBI Strain Identifiers MRGR3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 12
Contig Count 112
N50 Contigs 81,869 bp
Longest Contig 251,928 bp
Scaffold Count 112
N50 Scaffolds 81,869 bp
Longest Scaffold 251,928 bp
Genome Size 3,003,332 bp
Protein Count 2,901
Coding Density 84.81%
GC Percentage 32.61%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM40147v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470733
Country Switzerland: Geneva
Date 2013-05-24
Genbank Assembly Accession GCA_000401475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source catheter-related sepsis
Latitude Longitude None
Molecule Count N/A
CDS Count 3,152
Refseq Category na
Seq Rel Date 2013/05/24
Spanned Gaps 0
Species Taxid 1280
SSU Count 1
Submitter Novartis Vaccines and Diagnostics
Taxid 1137133
Total Gap Length 0
Translation Table 11
tRNA Count (total) 14
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHZL00000000.1