Clostridium sartagoforme_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sartagoforme_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sartagoforme
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sartagoforme; x__Clostridium sartagoforme AAU1
NCBI Strain Identifiers AAU1
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.52%
CheckM Contamination 1.86%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 323
N50 Contigs 25,206 bp
Longest Contig 108,654 bp
Scaffold Count 323
N50 Scaffolds 25,206 bp
Longest Scaffold 108,654 bp
Genome Size 3,983,371 bp
Protein Count 4,107
Coding Density 85.11%
GC Percentage 27.91%
Ambiguous Bases 17
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name CloSarAAU1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469632
Country India
Date 2013-05-23
Genbank Assembly Accession GCA_000401215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rumen liquor
Latitude Longitude None
Molecule Count N/A
CDS Count 3,842
Refseq Category representative genome
Seq Rel Date 2013/05/23
Spanned Gaps 0
Species Taxid 84031
SSU Count 1
Submitter Anand Agricultural University
Taxid 1202534
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASRV00000000.1