Idiomarina loihiensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Idiomarina; s__Idiomarina loihiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Idiomarinaceae; g__Idiomarina; s__Idiomarina loihiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Idiomarinaceae; g__Idiomarina; s__Idiomarina loihiensis; x__Idiomarina loihiensis GSL 199
NCBI Strain Identifiers GSL 199
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008465.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 2,839,759 bp
Longest Contig 2,839,759 bp
Scaffold Count 1
N50 Scaffolds 2,839,759 bp
Longest Scaffold 2,839,759 bp
Genome Size 2,839,759 bp
Protein Count 2,657
Coding Density 92.45%
GC Percentage 47.04%
Ambiguous Bases N/A
GTDB representative GCA_000008465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM40117v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02604286
Country None
Date 2013-5-23
Genbank Assembly Accession GCA_000401175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,649
Refseq Category na
Seq Rel Date 2013/05/23
Spanned Gaps 0
Species Taxid 135577
SSU Count 4
Submitter Utah State University
Taxid 1321370
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None