Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii CAIM 519 = NBRC 15631
NCBI Strain Identifiers CAIM 519;NBRC 15631
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 4
tRNA Count 13
Contig Count 388
N50 Contigs 73,528 bp
Longest Contig 236,521 bp
Scaffold Count 387
N50 Scaffolds 73,528 bp
Longest Scaffold 236,521 bp
Genome Size 5,116,899 bp
Protein Count 4,814
Coding Density 85.06%
GC Percentage 45.03%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM40034v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00036659
Country None
Date 2013-5-15
Genbank Assembly Accession GCA_000400345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,786
Refseq Category na
Seq Rel Date 2013/05/15
Spanned Gaps 1
Species Taxid 680
SSU Count 6
Submitter University of Miyazaki
Taxid 1224742
Total Gap Length 10
Translation Table 11
tRNA Count (total) 24
Type Material assembly from proxytype material
Unspanned Gaps 0
Version Status latest
WGS Master BAOF00000000.1