Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii 200612B
NCBI Strain Identifiers 200612B
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 230
N50 Contigs 111,395 bp
Longest Contig 312,616 bp
Scaffold Count 229
N50 Scaffolds 111,792 bp
Longest Scaffold 312,616 bp
Genome Size 5,828,972 bp
Protein Count 5,313
Coding Density 86.52%
GC Percentage 45.41%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM40020v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00036652
Country None
Date 2013-5-15
Genbank Assembly Accession GCA_000400205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,386
Refseq Category na
Seq Rel Date 2013/05/15
Spanned Gaps 1
Species Taxid 680
SSU Count 10
Submitter University of Miyazaki
Taxid 1279999
Total Gap Length 10
Translation Table 11
tRNA Count (total) 118
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BANY00000000.1