Enterococcus_B faecium
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium EnGen0175
NCBI Strain Identifiers VAN 342
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 1.5%
CheckM Strain Heterogeneity 100.0
5S Count 6
16S Count 6
23S Count 11
tRNA Count 19
Contig Count 54
N50 Contigs 240,861 bp
Longest Contig 495,894 bp
Scaffold Count 41
N50 Scaffolds 495,894 bp
Longest Scaffold 707,884 bp
Genome Size 2,840,742 bp
Protein Count 2,737
Coding Density 84.26%
GC Percentage 37.90%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Ente_faec_VAN_342_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00809003
Country Denmark
Date 2013-5-15
Genbank Assembly Accession GCA_000395785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,841
Refseq Category na
Seq Rel Date 2013/05/15
Spanned Gaps 13
Species Taxid 1352
SSU Count 6
Submitter Broad Institute
Taxid 1157470
Total Gap Length 10736
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIVA00000000.1