Enterococcus_B faecium
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium EnGen0153
NCBI Strain Identifiers HM1074
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 1.69%
CheckM Strain Heterogeneity 83.33
5S Count 6
16S Count 5
23S Count 8
tRNA Count 19
Contig Count 64
N50 Contigs 114,488 bp
Longest Contig 261,694 bp
Scaffold Count 27
N50 Scaffolds 286,741 bp
Longest Scaffold 499,512 bp
Genome Size 2,823,832 bp
Protein Count 2,695
Coding Density 83.43%
GC Percentage 38.10%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Ente_faec_HM1074_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00808978
Country None
Date 2013-5-14
Genbank Assembly Accession GCA_000392315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,840
Refseq Category na
Seq Rel Date 2013/05/14
Spanned Gaps 37
Species Taxid 1352
SSU Count 6
Submitter Broad Institute
Taxid 1157448
Total Gap Length 34102
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIUA00000000.1