Rhizobium laguerreae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__Rhizobium laguerreae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__Rhizobium leguminosarum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium leguminosarum; x__Rhizobium leguminosarum bv. viciae; x__Rhizobium leguminosarum bv. viciae 248
NCBI Strain Identifiers 248
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002008165.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 7
N50 Contigs 5,082,651 bp
Longest Contig 5,082,651 bp
Scaffold Count 7
N50 Scaffolds 5,082,651 bp
Longest Scaffold 5,082,651 bp
Genome Size 7,288,508 bp
Protein Count 6,985
Coding Density 87.46%
GC Percentage 60.89%
Ambiguous Bases 2
GTDB representative GCA_002008165.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM38515v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02261297
Country United Kingdom
Date 2013-04-26
Genbank Assembly Accession GCA_000385155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source East Anglia
Latitude Longitude 52.68 N 1.30 E
Molecule Count N/A
CDS Count 7,085
Refseq Category na
Seq Rel Date 2013/04/26
Spanned Gaps 0
Species Taxid 384
SSU Count 3
Submitter JGI
Taxid 936136
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARRT00000000.1