| GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylomonadaceae; g__Methylobacter; s__Methylobacter marinus |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylococcaceae; g__Methylobacter; s__Methylobacter marinus |
| Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylococcaceae; g__Methylobacter; s__Methylobacter marinus; x__Methylobacter marinus A45 |
| NCBI Strain Identifiers | A45 |
| GTDB Type Material Designation | type strain of species |
| GTDB Representative of Species | True (3 genomes in species cluster) |
| CheckM Completeness | 98.75% |
|---|---|
| CheckM Contamination | 0.47% |
| CheckM Strain Heterogeneity | 33.33 |
| 5S Count | 3 |
| 16S Count | 3 |
| 23S Count | 3 |
| tRNA Count | 20 |
| Contig Count | 12 |
| N50 Contigs | 840,515 bp |
| Longest Contig | 1,108,238 bp |
| Scaffold Count | 2 |
| N50 Scaffolds | 4,984,690 bp |
| Longest Scaffold | 4,984,690 bp |
| Genome Size | 4,988,792 bp |
| Protein Count | 4,501 |
| Coding Density | 85.96% |
| GC Percentage | 52.67% |
| Ambiguous Bases | 26 |
| GTDB representative of species | True |
| Assembly Level | Scaffold |
|---|---|
| Assembly Name | ASM38385v1 |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMN02261244 |
| Country | None |
| Date | 2013-4-26 |
| Genbank Assembly Accession | GCA_000383855.1 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | not provided; submitted under MIGS 2.1 |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 4,473 |
| Refseq Category | representative genome |
| Seq Rel Date | 2013/04/26 |
| Spanned Gaps | 10 |
| Species Taxid | 34058 |
| SSU Count | 3 |
| Submitter | JGI |
| Taxid | 674036 |
| Total Gap Length | 910 |
| Translation Table | 11 |
| tRNA Count (total) | 50 |
| Type Material | assembly from type material |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | ARVS00000000.1 |