Novispirillum itersonii
Isolate HQ 5S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Rhodospirillaceae; g__Novispirillum; s__Novispirillum itersonii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Rhodospirillaceae; g__Novispirillum; s__Novispirillum itersonii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Rhodospirillaceae; g__Novispirillum; s__Novispirillum itersonii; sb__Novispirillum itersonii subsp. itersonii; x__Novispirillum itersonii subsp. itersonii ATCC 12639
NCBI Strain Identifiers ATCC 12639
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 0
23S Count 1
tRNA Count 19
Contig Count 39
N50 Contigs 300,774 bp
Longest Contig 658,577 bp
Scaffold Count 34
N50 Scaffolds 301,077 bp
Longest Scaffold 734,273 bp
Genome Size 4,290,651 bp
Protein Count 3,830
Coding Density 88.44%
GC Percentage 63.13%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM38198v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441318
Country None
Date 2013-4-24
Genbank Assembly Accession GCA_000381985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,787
Refseq Category representative genome
Seq Rel Date 2013/04/24
Spanned Gaps 5
Species Taxid 189
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1279038
Total Gap Length 1040
Translation Table 11
tRNA Count (total) 60
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARMX00000000.1