Edaphobacter sp000381605
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Acidobacteriaceae; g__Edaphobacter; s__Edaphobacter sp000381605
Filtered NCBI Taxonomy d__Bacteria; p__Acidobacteria; c__Acidobacteriia; o__Acidobacteriales; f__Acidobacteriaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Acidobacteria; c__Acidobacteriia; o__Acidobacteriales; f__Acidobacteriaceae; x__unclassified Acidobacteriaceae; s__Acidobacteriaceae bacterium KBS 89
NCBI Strain Identifiers KBS 89
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.86%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 14
N50 Contigs 943,631 bp
Longest Contig 1,181,018 bp
Scaffold Count 13
N50 Scaffolds 943,631 bp
Longest Scaffold 1,636,164 bp
Genome Size 6,009,926 bp
Protein Count 5,060
Coding Density 87.98%
GC Percentage 57.55%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM38160v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441326
Country None
Date 2013-4-24
Genbank Assembly Accession GCA_000381605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,986
Refseq Category na
Seq Rel Date 2013/04/24
Spanned Gaps 1
Species Taxid 1267534
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1267534
Total Gap Length 134
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARME00000000.1