Thioalkalivibrio sp000378305
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Ectothiorhodospirales; f__Thioalkalivibrionaceae; g__Thioalkalivibrio; s__Thioalkalivibrio sp000378305
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Ectothiorhodospiraceae; g__Thioalkalivibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Ectothiorhodospiraceae; g__Thioalkalivibrio; s__Thioalkalivibrio sp. ALRh
NCBI Strain Identifiers ALRh
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000378305.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 19
N50 Contigs 217,679 bp
Longest Contig 859,353 bp
Scaffold Count 14
N50 Scaffolds 1,622,820 bp
Longest Scaffold 1,622,820 bp
Genome Size 2,747,676 bp
Protein Count 2,562
Coding Density 90.44%
GC Percentage 66.01%
Ambiguous Bases N/A
GTDB representative GCA_000378305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM38142v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440484
Country None
Date 2013-4-24
Genbank Assembly Accession GCA_000381425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,585
Refseq Category na
Seq Rel Date 2013/04/24
Spanned Gaps 5
Species Taxid 1266911
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1266911
Total Gap Length 723
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARLV00000000.1