Thermus scotoductus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Deinococcota; c__Deinococci; o__Deinococcales; f__Thermaceae; g__Thermus; s__Thermus scotoductus
Filtered NCBI Taxonomy d__Bacteria; p__Deinococcus-Thermus; c__Deinococci; o__Thermales; f__Thermaceae; g__Thermus; s__Thermus scotoductus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Deinococcus-Thermus; c__Deinococci; o__Thermales; f__Thermaceae; g__Thermus; s__Thermus scotoductus; x__Thermus scotoductus DSM 8553
NCBI Strain Identifiers DSM 8553
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (44 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.27%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 91
N50 Contigs 45,595 bp
Longest Contig 148,050 bp
Scaffold Count 84
N50 Scaffolds 52,275 bp
Longest Scaffold 148,050 bp
Genome Size 2,070,699 bp
Protein Count 2,248
Coding Density 93.43%
GC Percentage 64.81%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM38104v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441334
Country Iceland
Date 2013-4-24
Genbank Assembly Accession GCA_000381045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,220
Refseq Category na
Seq Rel Date 2013/04/24
Spanned Gaps 7
Species Taxid 37636
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1123391
Total Gap Length 1396
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARLD00000000.1