Thioalkalivibrio sp000378305
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Ectothiorhodospirales; f__Thioalkalivibrionaceae; g__Thioalkalivibrio; s__Thioalkalivibrio sp000378305
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Ectothiorhodospiraceae; g__Thioalkalivibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Ectothiorhodospiraceae; g__Thioalkalivibrio; s__Thioalkalivibrio sp. ALJ9
NCBI Strain Identifiers ALJ9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000378305.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 11
N50 Contigs 607,192 bp
Longest Contig 1,245,032 bp
Scaffold Count 11
N50 Scaffolds 607,192 bp
Longest Scaffold 1,245,032 bp
Genome Size 2,933,045 bp
Protein Count 2,731
Coding Density 90.18%
GC Percentage 65.74%
Ambiguous Bases N/A
GTDB representative GCA_000378305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM38058v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440420
Country None
Date 2013-04-23
Genbank Assembly Accession GCA_000380585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,757
Refseq Category na
Seq Rel Date 2013/04/23
Spanned Gaps 0
Species Taxid 1158758
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1158758
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AQYE00000000.1