Streptococcus orisratti
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus orisratti
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus orisratti
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus orisratti; x__Streptococcus orisratti DSM 15617
NCBI Strain Identifiers DSM 15617
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 0.75%
CheckM Strain Heterogeneity 66.67
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 92
N50 Contigs 50,722 bp
Longest Contig 167,162 bp
Scaffold Count 90
N50 Scaffolds 51,075 bp
Longest Scaffold 167,162 bp
Genome Size 2,416,134 bp
Protein Count 2,351
Coding Density 85.12%
GC Percentage 38.53%
Ambiguous Bases 63
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM38010v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02256410
Country USA
Date 2013-4-23
Genbank Assembly Accession GCA_000380105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Surfaces of lower molars of Sprague Dawley rat
Latitude Longitude 38.750 N 77.475 W
Molecule Count N/A
CDS Count 2,364
Refseq Category representative genome
Seq Rel Date 2013/04/23
Spanned Gaps 2
Species Taxid 114652
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1123311
Total Gap Length 1013
Translation Table 11
tRNA Count (total) 26
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARCG00000000.1