Lamprocystis purpurea
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Chromatiaceae; g__Lamprocystis; s__Lamprocystis purpurea
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Chromatiaceae; g__Lamprocystis; s__Lamprocystis purpurea
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Chromatiaceae; g__Lamprocystis; s__Lamprocystis purpurea; x__Lamprocystis purpurea DSM 4197
NCBI Strain Identifiers DSM 4197
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 1.67%
CheckM Strain Heterogeneity 8.33
5S Count 3
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 224
N50 Contigs 70,256 bp
Longest Contig 277,962 bp
Scaffold Count 213
N50 Scaffolds 82,803 bp
Longest Scaffold 277,962 bp
Genome Size 6,908,745 bp
Protein Count 6,130
Coding Density 85.10%
GC Percentage 64.34%
Ambiguous Bases 367
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM37952v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02256451
Country None
Date 2013-4-23
Genbank Assembly Accession GCA_000379525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 6,119
Refseq Category representative genome
Seq Rel Date 2013/04/23
Spanned Gaps 11
Species Taxid 61598
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 765909
Total Gap Length 5865
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARBC00000000.1