Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Wenxinia; s__Wenxinia marina
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Wenxinia; s__Wenxinia marina
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Wenxinia; s__Wenxinia marina; x__Wenxinia marina DSM 24838
NCBI Strain Identifiers DSM 24838
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 42
N50 Contigs 193,930 bp
Longest Contig 386,680 bp
Scaffold Count 41
N50 Scaffolds 193,930 bp
Longest Scaffold 386,680 bp
Genome Size 4,175,892 bp
Protein Count 4,045
Coding Density 89.58%
GC Percentage 70.55%
Ambiguous Bases 43
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM37948v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02256455
Country China
Date 2013-4-23
Genbank Assembly Accession GCA_000379485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sediment of an oilfield
Latitude Longitude None
Molecule Count N/A
CDS Count 3,991
Refseq Category representative genome
Seq Rel Date 2013/04/23
Spanned Gaps 1
Species Taxid 390641
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1123501
Total Gap Length 398
Translation Table 11
tRNA Count (total) 44
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARAY00000000.1