Thioalkalivibrio sp000377405
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Ectothiorhodospirales; f__Thioalkalivibrionaceae; g__Thioalkalivibrio; s__Thioalkalivibrio sp000377405
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Ectothiorhodospiraceae; g__Thioalkalivibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Chromatiales; f__Ectothiorhodospiraceae; g__Thioalkalivibrio; s__Thioalkalivibrio sp. ALE25
NCBI Strain Identifiers ALE25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000377405.1)
Genome Characteristics
CheckM Completeness 99.96%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 26
N50 Contigs 180,446 bp
Longest Contig 321,045 bp
Scaffold Count 22
N50 Scaffolds 219,607 bp
Longest Scaffold 321,045 bp
Genome Size 2,855,242 bp
Protein Count 2,692
Coding Density 89.19%
GC Percentage 67.16%
Ambiguous Bases N/A
GTDB representative GCA_000377405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM37728v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441347
Country None
Date 2013-4-23
Genbank Assembly Accession GCA_000377285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,739
Refseq Category na
Seq Rel Date 2013/04/23
Spanned Gaps 4
Species Taxid 1158177
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1158177
Total Gap Length 2295
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARIA00000000.1