Micromonospora arenicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora arenicola
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola; x__Salinispora arenicola CNY260
NCBI Strain Identifiers CNY260
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006716065.1)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 73
N50 Contigs 257,693 bp
Longest Contig 484,575 bp
Scaffold Count 63
N50 Scaffolds 335,119 bp
Longest Scaffold 502,995 bp
Genome Size 5,775,769 bp
Protein Count 5,174
Coding Density 87.09%
GC Percentage 69.56%
Ambiguous Bases N/A
GTDB representative GCA_006716065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM37518v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441356
Country None
Date 2013-4-23
Genbank Assembly Accession GCA_000375185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,189
Refseq Category na
Seq Rel Date 2013/04/23
Spanned Gaps 10
Species Taxid 168697
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 1169177
Total Gap Length 4325
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARHG00000000.1