Neomegalonema perideroedes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Neomegalonemataceae; g__Neomegalonema; s__Neomegalonema perideroedes
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Neomegalonema; s__Neomegalonema perideroedes
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Neomegalonema; s__Neomegalonema perideroedes; x__Neomegalonema perideroedes DSM 15528
NCBI Strain Identifiers DSM 15528
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 22
N50 Contigs 630,437 bp
Longest Contig 866,645 bp
Scaffold Count 17
N50 Scaffolds 1,196,865 bp
Longest Scaffold 1,522,649 bp
Genome Size 3,409,949 bp
Protein Count 3,034
Coding Density 89.38%
GC Percentage 67.21%
Ambiguous Bases 5
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM37414v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441696
Country Denmark
Date 2013-4-23
Genbank Assembly Accession GCA_000374145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 55.758 N 8.924 E
Molecule Count N/A
CDS Count 3,068
Refseq Category representative genome
Seq Rel Date 2013/04/23
Spanned Gaps 5
Species Taxid 217219
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1122218
Total Gap Length 972
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARFG00000000.1