Segetibacter koreensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Chitinophagales; f__Chitinophagaceae; g__Segetibacter; s__Segetibacter koreensis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Chitinophagia; o__Chitinophagales; f__Chitinophagaceae; g__Segetibacter; s__Segetibacter koreensis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Chitinophagia; o__Chitinophagales; f__Chitinophagaceae; g__Segetibacter; s__Segetibacter koreensis; x__Segetibacter koreensis DSM 18137
NCBI Strain Identifiers DSM 18137
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 3.94%
CheckM Strain Heterogeneity 4.17
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 75
N50 Contigs 223,927 bp
Longest Contig 559,288 bp
Scaffold Count 73
N50 Scaffolds 245,701 bp
Longest Scaffold 559,288 bp
Genome Size 6,107,890 bp
Protein Count 5,151
Coding Density 84.50%
GC Percentage 37.41%
Ambiguous Bases 192
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM37404v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440437
Country Korea
Date 2013-4-23
Genbank Assembly Accession GCA_000374045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,059
Refseq Category representative genome
Seq Rel Date 2013/04/23
Spanned Gaps 2
Species Taxid 398037
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1123248
Total Gap Length 685
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARFB00000000.1