Corynebacterium ciconiae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium ciconiae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium ciconiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium ciconiae; x__Corynebacterium ciconiae DSM 44920
NCBI Strain Identifiers DSM 44920
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 22
N50 Contigs 314,418 bp
Longest Contig 858,068 bp
Scaffold Count 22
N50 Scaffolds 314,418 bp
Longest Scaffold 858,068 bp
Genome Size 2,545,566 bp
Protein Count 2,218
Coding Density 88.71%
GC Percentage 62.07%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM37238v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02256507
Country Spain
Date 2013-04-19
Genbank Assembly Accession GCA_000372385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Trachea of apparently healthy wild nestling black storks (Ciconia nigra)
Latitude Longitude 40.416 N 3.700 W
Molecule Count N/A
CDS Count 2,174
Refseq Category representative genome
Seq Rel Date 2013/04/19
Spanned Gaps 0
Species Taxid 227319
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1121356
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AQUW00000000.1