Acinetobacter baumannii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter baumannii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter baumannii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; x__Acinetobacter calcoaceticus/baumannii complex; s__Acinetobacter baumannii; x__Acinetobacter baumannii NIPH 60
NCBI Strain Identifiers NIPH 60
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002811175.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 65
N50 Contigs 165,157 bp
Longest Contig 436,017 bp
Scaffold Count 33
N50 Scaffolds 2,774,117 bp
Longest Scaffold 2,774,117 bp
Genome Size 3,981,253 bp
Protein Count 3,745
Coding Density 86.03%
GC Percentage 39.21%
Ambiguous Bases N/A
GTDB representative GCA_002811175.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Acin_baum_NIPH_60_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01087913
Country Czech Republic: Praha
Date 2013-4-19
Genbank Assembly Accession GCA_000368545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 3,757
Refseq Category na
Seq Rel Date 2013/04/19
Spanned Gaps 32
Species Taxid 470
SSU Count 8
Submitter Broad Institute
Taxid 1217647
Total Gap Length 34626
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master APPM00000000.1