Acinetobacter johnsonii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter johnsonii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter johnsonii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter johnsonii; x__Acinetobacter johnsonii CIP 64.6
NCBI Strain Identifiers CIP 64.6
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (31 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 13
tRNA Count 20
Contig Count 48
N50 Contigs 124,388 bp
Longest Contig 265,229 bp
Scaffold Count 11
N50 Scaffolds 1,088,563 bp
Longest Scaffold 1,125,485 bp
Genome Size 3,608,403 bp
Protein Count 3,481
Coding Density 84.97%
GC Percentage 41.45%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Acin_john_CIP_64_6_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01828184
Country None
Date 2013-4-19
Genbank Assembly Accession GCA_000368045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Duodenum
Latitude Longitude None
Molecule Count N/A
CDS Count 3,439
Refseq Category na
Seq Rel Date 2013/04/19
Spanned Gaps 37
Species Taxid 40214
SSU Count 7
Submitter Broad Institute
Taxid 1217663
Total Gap Length 25704
Translation Table 11
tRNA Count (total) 78
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master APON00000000.1