GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter johnsonii |
---|---|
Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter johnsonii |
Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter johnsonii; x__Acinetobacter johnsonii CIP 64.6 |
NCBI Strain Identifiers | CIP 64.6 |
GTDB Type Material Designation | type strain of species |
GTDB Representative of Species | True (31 genomes in species cluster) |
CheckM Completeness | 100.0% |
---|---|
CheckM Contamination | 0.27% |
CheckM Strain Heterogeneity | 0.0 |
5S Count | 7 |
16S Count | 7 |
23S Count | 13 |
tRNA Count | 20 |
Contig Count | 48 |
N50 Contigs | 124,388 bp |
Longest Contig | 265,229 bp |
Scaffold Count | 11 |
N50 Scaffolds | 1,088,563 bp |
Longest Scaffold | 1,125,485 bp |
Genome Size | 3,608,403 bp |
Protein Count | 3,481 |
Coding Density | 84.97% |
GC Percentage | 41.45% |
Ambiguous Bases | N/A |
GTDB representative of species | True |
Assembly Level | Scaffold |
---|---|
Assembly Name | Acin_john_CIP_64_6_V1 |
Assembly Type | n/a |
Bioproject | PRJNA224116 |
Biosample | SAMN01828184 |
Country | None |
Date | 2013-4-19 |
Genbank Assembly Accession | GCA_000368045.1 |
Genome Category | Isolate |
Genome Representation | full |
Isolate | None |
Isolation Source | Duodenum |
Latitude Longitude | None |
Molecule Count | N/A |
CDS Count | 3,439 |
Refseq Category | na |
Seq Rel Date | 2013/04/19 |
Spanned Gaps | 37 |
Species Taxid | 40214 |
SSU Count | 7 |
Submitter | Broad Institute |
Taxid | 1217663 |
Total Gap Length | 25704 |
Translation Table | 11 |
tRNA Count (total) | 78 |
Type Material | assembly from type material |
Unspanned Gaps | 0 |
Version Status | latest |
WGS Master | APON00000000.1 |