Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M1556
NCBI Strain Identifiers M1556
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 83.33
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 15
N50 Contigs 380,684 bp
Longest Contig 643,553 bp
Scaffold Count 7
N50 Scaffolds 730,081 bp
Longest Scaffold 849,881 bp
Genome Size 2,895,270 bp
Protein Count 2,683
Coding Density 83.08%
GC Percentage 32.81%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M1556_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00809196
Country USA: Boston; MA
Date 2013-4-12
Genbank Assembly Accession GCA_000363725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,954
Refseq Category na
Seq Rel Date 2013/04/12
Spanned Gaps 8
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1158503
Total Gap Length 13687
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJBU00000000.1