Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis M0881
NCBI Strain Identifiers M0881
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.25%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 2
tRNA Count 20
Contig Count 40
N50 Contigs 102,303 bp
Longest Contig 490,348 bp
Scaffold Count 9
N50 Scaffolds 900,469 bp
Longest Scaffold 1,005,214 bp
Genome Size 2,678,281 bp
Protein Count 2,448
Coding Density 81.38%
GC Percentage 32.04%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0881_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01047814
Country USA: Boston; MA
Date 2013-4-12
Genbank Assembly Accession GCA_000362145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,557
Refseq Category na
Seq Rel Date 2013/04/12
Spanned Gaps 31
Species Taxid 1282
SSU Count 5
Submitter Broad Institute
Taxid 1213731
Total Gap Length 38611
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOAJ00000000.1