Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0006
NCBI Strain Identifiers M0006
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 31
N50 Contigs 215,488 bp
Longest Contig 1,070,496 bp
Scaffold Count 10
N50 Scaffolds 960,750 bp
Longest Scaffold 1,297,927 bp
Genome Size 2,941,847 bp
Protein Count 2,727
Coding Density 82.87%
GC Percentage 32.85%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0006_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00809157
Country USA: Boston; MA
Date 2013-4-12
Genbank Assembly Accession GCA_000359965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,995
Refseq Category na
Seq Rel Date 2013/04/12
Spanned Gaps 21
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1158507
Total Gap Length 29508
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJBY00000000.1