Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus HI168
NCBI Strain Identifiers HI168
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 6
tRNA Count 20
Contig Count 16
N50 Contigs 406,079 bp
Longest Contig 666,785 bp
Scaffold Count 6
N50 Scaffolds 1,763,059 bp
Longest Scaffold 1,763,059 bp
Genome Size 2,968,142 bp
Protein Count 2,777
Coding Density 83.19%
GC Percentage 32.70%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_HI168_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00792170
Country USA: Boston; MA
Date 2013-4-12
Genbank Assembly Accession GCA_000359905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,069
Refseq Category na
Seq Rel Date 2013/04/12
Spanned Gaps 10
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1157001
Total Gap Length 5683
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIVN00000000.1