Tropheryma whipplei
Isolate MQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Tropheryma; s__Tropheryma whipplei
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__; g__Tropheryma; s__Tropheryma whipplei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; x__unclassified Micrococcales; g__Tropheryma; s__Tropheryma whipplei; x__Tropheryma whipplei str. Sali28
NCBI Strain Identifiers Sali28
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000007485.1)
Genome Characteristics
CheckM Completeness 75.1%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 141
N50 Contigs 85,923 bp
Longest Contig 135,044 bp
Scaffold Count 1
N50 Scaffolds 927,465 bp
Longest Scaffold 927,465 bp
Genome Size 927,465 bp
Protein Count 904
Coding Density 82.93%
GC Percentage 46.38%
Ambiguous Bases 107
GTDB representative GCA_000007485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name G165
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272646
Country None
Date 2013-12-19
Genbank Assembly Accession GCA_000359265.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 823
Refseq Category na
Seq Rel Date 2013/12/19
Spanned Gaps 140
Species Taxid 2039
SSU Count 1
Submitter ebi
Taxid 1294032
Total Gap Length 40981
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAUT000000000.2