Tropheryma whipplei
Isolate MQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Tropheryma; s__Tropheryma whipplei
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__; g__Tropheryma; s__Tropheryma whipplei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; x__unclassified Micrococcales; g__Tropheryma; s__Tropheryma whipplei; x__Tropheryma whipplei str. Endo27
NCBI Strain Identifiers Endo27
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000007485.1)
Genome Characteristics
CheckM Completeness 75.1%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 189
N50 Contigs 85,919 bp
Longest Contig 135,045 bp
Scaffold Count 1
N50 Scaffolds 927,598 bp
Longest Scaffold 927,598 bp
Genome Size 927,598 bp
Protein Count 893
Coding Density 82.47%
GC Percentage 46.38%
Ambiguous Bases 127
GTDB representative GCA_000007485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name G164
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272435
Country None
Date 2013-12-19
Genbank Assembly Accession GCA_000359245.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 817
Refseq Category na
Seq Rel Date 2013/12/19
Spanned Gaps 188
Species Taxid 2039
SSU Count 1
Submitter ebi
Taxid 1294031
Total Gap Length 45491
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAUS000000000.2