Vibrio alginolyticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio alginolyticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio alginolyticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio alginolyticus; x__Vibrio alginolyticus NBRC 15630 = ATCC 17749
NCBI Strain Identifiers ATCC 17749
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (48 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 11
23S Count 11
tRNA Count 20
Contig Count 2
N50 Contigs 3,334,467 bp
Longest Contig 3,334,467 bp
Scaffold Count 2
N50 Scaffolds 3,334,467 bp
Longest Scaffold 3,334,467 bp
Genome Size 5,146,637 bp
Protein Count 4,576
Coding Density 86.16%
GC Percentage 44.68%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM35417v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603463
Country None
Date 2013-9-10
Genbank Assembly Accession GCA_000354175.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 4,610
Refseq Category representative genome
Seq Rel Date 2013/09/10
Spanned Gaps 0
Species Taxid 663
SSU Count 11
Submitter Jinan Military General Hospital
Taxid 1219076
Total Gap Length 0
Translation Table 11
tRNA Count (total) 105
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None