Clostridium botulinum_A
Isolate HQ 5S/16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum; x__Clostridium botulinum CB11/1-1
NCBI Strain Identifiers 1-1;CB11;CB11/1-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000827935.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.16%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 13
Contig Count 171
N50 Contigs 43,401 bp
Longest Contig 147,152 bp
Scaffold Count 171
N50 Scaffolds 43,401 bp
Longest Scaffold 147,152 bp
Genome Size 3,823,307 bp
Protein Count 3,567
Coding Density 83.53%
GC Percentage 27.06%
Ambiguous Bases N/A
GTDB representative GCA_000827935.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM35383v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471792
Country Finland
Date 2013-04-05
Genbank Assembly Accession GCA_000353835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Finnish food; fish roe
Latitude Longitude None
Molecule Count N/A
CDS Count 3,446
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 0
Species Taxid 1491
SSU Count 1
Submitter Institute of Biotechnology, University of Helsinki
Taxid 1289590
Total Gap Length 0
Translation Table 11
tRNA Count (total) 26
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AORM00000000.1