Escherichia coli_D
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli_D
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE202
NCBI Strain Identifiers KTE202
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000026325.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 8
23S Count 9
tRNA Count 20
Contig Count 46
N50 Contigs 261,422 bp
Longest Contig 749,176 bp
Scaffold Count 8
N50 Scaffolds 3,558,560 bp
Longest Scaffold 3,558,560 bp
Genome Size 5,195,201 bp
Protein Count 4,750
Coding Density 87.19%
GC Percentage 50.58%
Ambiguous Bases 1
GTDB representative GCA_000026325.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE202_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00974057
Country None
Date 2013-04-05
Genbank Assembly Accession GCA_000352965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,202
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 38
Species Taxid 562
SSU Count 5
Submitter Broad Institute
Taxid 1181748
Total Gap Length 36363
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANXA00000000.1