Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE194
NCBI Strain Identifiers KTE194
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 34
N50 Contigs 244,055 bp
Longest Contig 560,470 bp
Scaffold Count 9
N50 Scaffolds 1,558,233 bp
Longest Scaffold 2,176,727 bp
Genome Size 5,156,046 bp
Protein Count 4,770
Coding Density 87.35%
GC Percentage 50.40%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE194_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00974049
Country None
Date 2013-4-5
Genbank Assembly Accession GCA_000352805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,149
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 25
Species Taxid 562
SSU Count 6
Submitter Broad Institute
Taxid 1181740
Total Gap Length 24450
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANWS00000000.1