Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE141
NCBI Strain Identifiers KTE141
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 35
N50 Contigs 280,658 bp
Longest Contig 537,096 bp
Scaffold Count 7
N50 Scaffolds 1,998,151 bp
Longest Scaffold 2,023,461 bp
Genome Size 5,029,119 bp
Protein Count 4,603
Coding Density 87.18%
GC Percentage 50.65%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE141_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00854673
Country Denmark
Date 2013-04-05
Genbank Assembly Accession GCA_000352645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,799
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 28
Species Taxid 562
SSU Count 6
Submitter Broad Institute
Taxid 1182721
Total Gap Length 41724
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANWK00000000.1