Escherichia coli_D
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli_D
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE115
NCBI Strain Identifiers KTE115
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000026325.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 20.0
5S Count 5
16S Count 6
23S Count 9
tRNA Count 20
Contig Count 32
N50 Contigs 405,444 bp
Longest Contig 652,517 bp
Scaffold Count 5
N50 Scaffolds 2,794,411 bp
Longest Scaffold 2,794,411 bp
Genome Size 5,174,661 bp
Protein Count 4,747
Coding Density 87.12%
GC Percentage 50.62%
Ambiguous Bases N/A
GTDB representative GCA_000026325.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE115_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00854659
Country Denmark
Date 2013-4-5
Genbank Assembly Accession GCA_000352525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,159
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 27
Species Taxid 562
SSU Count 7
Submitter Broad Institute
Taxid 1182707
Total Gap Length 35766
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANWE00000000.1