Escherichia flexneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE29
NCBI Strain Identifiers KTE29
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 42
N50 Contigs 258,827 bp
Longest Contig 490,796 bp
Scaffold Count 3
N50 Scaffolds 2,617,114 bp
Longest Scaffold 2,617,114 bp
Genome Size 4,775,481 bp
Protein Count 4,384
Coding Density 87.29%
GC Percentage 50.86%
Ambiguous Bases N/A
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE29_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00847666
Country None
Date 2013-4-5
Genbank Assembly Accession GCA_000352245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,728
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 39
Species Taxid 562
SSU Count 7
Submitter Broad Institute
Taxid 1169348
Total Gap Length 45300
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANVQ00000000.1