Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE23
NCBI Strain Identifiers KTE23
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 10
23S Count 7
tRNA Count 20
Contig Count 14
N50 Contigs 535,626 bp
Longest Contig 1,078,927 bp
Scaffold Count 6
N50 Scaffolds 2,495,066 bp
Longest Scaffold 2,495,066 bp
Genome Size 4,876,934 bp
Protein Count 4,533
Coding Density 88.12%
GC Percentage 50.55%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE23_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00847660
Country None
Date 2013-4-5
Genbank Assembly Accession GCA_000352205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,868
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 8
Species Taxid 562
SSU Count 10
Submitter Broad Institute
Taxid 1169342
Total Gap Length 6960
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANVO00000000.1