Escherichia coli_D
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli_D
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE213
NCBI Strain Identifiers KTE213
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000026325.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 42.86
5S Count 7
16S Count 6
23S Count 6
tRNA Count 19
Contig Count 59
N50 Contigs 213,481 bp
Longest Contig 470,569 bp
Scaffold Count 4
N50 Scaffolds 5,077,671 bp
Longest Scaffold 5,077,671 bp
Genome Size 5,082,634 bp
Protein Count 4,721
Coding Density 86.70%
GC Percentage 50.57%
Ambiguous Bases N/A
GTDB representative GCA_000026325.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE213_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00974068
Country None
Date 2013-04-05
Genbank Assembly Accession GCA_000351185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,151
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 55
Species Taxid 562
SSU Count 6
Submitter Broad Institute
Taxid 1181759
Total Gap Length 50087
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANTP00000000.1