Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE191
NCBI Strain Identifiers KTE191
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 8
tRNA Count 20
Contig Count 35
N50 Contigs 345,480 bp
Longest Contig 1,170,643 bp
Scaffold Count 12
N50 Scaffolds 1,530,804 bp
Longest Scaffold 1,601,775 bp
Genome Size 5,401,591 bp
Protein Count 5,044
Coding Density 87.01%
GC Percentage 50.44%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE191_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00974046
Country None
Date 2013-04-05
Genbank Assembly Accession GCA_000351005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,268
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 23
Species Taxid 562
SSU Count 6
Submitter Broad Institute
Taxid 1181737
Total Gap Length 25832
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANTG00000000.1