Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE15
NCBI Strain Identifiers KTE15
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.12%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 4
23S Count 8
tRNA Count 20
Contig Count 57
N50 Contigs 267,032 bp
Longest Contig 573,558 bp
Scaffold Count 13
N50 Scaffolds 807,666 bp
Longest Scaffold 2,469,965 bp
Genome Size 5,253,859 bp
Protein Count 4,863
Coding Density 86.89%
GC Percentage 50.64%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE15_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00847652
Country None
Date 2013-04-05
Genbank Assembly Accession GCA_000350745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,319
Refseq Category na
Seq Rel Date 2013/04/05
Spanned Gaps 44
Species Taxid 562
SSU Count 5
Submitter Broad Institute
Taxid 1169334
Total Gap Length 38864
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANST00000000.1