Escherichia flexneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli K-12; x__Escherichia coli str. K-12 substr. MDS42
NCBI Strain Identifiers K-12
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 97.12%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 1
N50 Contigs 3,976,195 bp
Longest Contig 3,976,195 bp
Scaffold Count 1
N50 Scaffolds 3,976,195 bp
Longest Scaffold 3,976,195 bp
Genome Size 3,976,195 bp
Protein Count 3,621
Coding Density 87.86%
GC Percentage 51.14%
Ambiguous Bases N/A
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM35018v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00006056
Country None
Date 2011-12-02
Genbank Assembly Accession GCA_000350185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,897
Refseq Category na
Seq Rel Date 2011/12/02
Spanned Gaps 0
Species Taxid 562
SSU Count 7
Submitter Osaka University
Taxid 1110693
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None