Ilumatobacter_A nonamiensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Acidimicrobiia; o__Acidimicrobiales; f__Ilumatobacteraceae; g__Ilumatobacter_A; s__Ilumatobacter_A nonamiensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Acidimicrobiia; o__Acidimicrobiales; f__Ilumatobacteraceae; g__Ilumatobacter; s__Ilumatobacter nonamiensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Acidimicrobiia; o__Acidimicrobiales; f__Ilumatobacteraceae; g__Ilumatobacter; s__Ilumatobacter nonamiensis; x__Ilumatobacter nonamiensis YM16-303
NCBI Strain Identifiers YM16-303
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.15%
CheckM Contamination 3.42%
CheckM Strain Heterogeneity 25.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 399
N50 Contigs 21,223 bp
Longest Contig 94,156 bp
Scaffold Count 399
N50 Scaffolds 21,223 bp
Longest Scaffold 94,156 bp
Genome Size 4,282,232 bp
Protein Count 4,164
Coding Density 93.16%
GC Percentage 66.99%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM35014v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00036665
Country None
Date 2013-03-27
Genbank Assembly Accession GCA_000350145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,058
Refseq Category representative genome
Seq Rel Date 2013/03/27
Spanned Gaps 0
Species Taxid 467093
SSU Count 1
Submitter Kitasato University
Taxid 1313171
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAOL00000000.1