Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio harveyi
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio harveyi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio harveyi; x__Vibrio harveyi AOD131
NCBI Strain Identifiers AOD131
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001591145.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 3
tRNA Count 18
Contig Count 103
N50 Contigs 312,742 bp
Longest Contig 1,002,471 bp
Scaffold Count 61
N50 Scaffolds 791,671 bp
Longest Scaffold 1,274,549 bp
Genome Size 6,125,072 bp
Protein Count 5,602
Coding Density 86.12%
GC Percentage 44.84%
Ambiguous Bases N/A
GTDB representative GCA_001591145.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name VHAOD131.1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470649
Country Taiwan: Kaohsiung
Date 2013-03-21
Genbank Assembly Accession GCA_000347555.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,707
Refseq Category na
Seq Rel Date 2013/03/21
Spanned Gaps 42
Species Taxid 669
SSU Count 2
Submitter Food Industry Research and Development Institute
Taxid 1287887
Total Gap Length 4845
Translation Table 11
tRNA Count (total) 94
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOMR00000000.1