Leptospira alstonii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira alstonii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira alstonii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira alstonii; x__Leptospira alstonii serovar Sichuan; x__Leptospira alstonii serovar Sichuan str. 79601
NCBI Strain Identifiers 79601
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 4
tRNA Count 20
Contig Count 125
N50 Contigs 68,494 bp
Longest Contig 295,179 bp
Scaffold Count 125
N50 Scaffolds 68,494 bp
Longest Scaffold 295,179 bp
Genome Size 4,436,408 bp
Protein Count 4,115
Coding Density 85.75%
GC Percentage 42.48%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name gls454194v01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01801604
Country None
Date 2013-03-15
Genbank Assembly Accession GCA_000347175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,217
Refseq Category na
Seq Rel Date 2013/03/15
Spanned Gaps 0
Species Taxid 28452
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1218565
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ANIK00000000.1