Listeria fleischmannii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria fleischmannii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria fleischmannii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria fleischmannii; sb__Listeria fleischmannii subsp. fleischmannii; x__Listeria fleischmannii subsp. fleischmannii LU2006-1
NCBI Strain Identifiers LU2006-1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (6 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.34%
CheckM Contamination 1.54%
CheckM Strain Heterogeneity 40.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 102
N50 Contigs 48,159 bp
Longest Contig 148,496 bp
Scaffold Count 102
N50 Scaffolds 48,159 bp
Longest Scaffold 148,496 bp
Genome Size 2,841,134 bp
Protein Count 3,096
Coding Density 87.84%
GC Percentage 38.32%
Ambiguous Bases 74
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM34417v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02415229
Country Switzerland
Date 2013-03-04
Genbank Assembly Accession GCA_000344175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source cheese
Latitude Longitude None
Molecule Count N/A
CDS Count 2,852
Refseq Category na
Seq Rel Date 2013/03/04
Spanned Gaps 0
Species Taxid 1069827
SSU Count 8
Submitter Cornell University
Taxid 1214117
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ALWW00000000.1