Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Jalna; x__Leptospira interrogans serovar Jalna str. 2008720117
NCBI Strain Identifiers 2008720117
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 92.94%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 176
N50 Contigs 48,689 bp
Longest Contig 153,981 bp
Scaffold Count 176
N50 Scaffolds 48,689 bp
Longest Scaffold 153,981 bp
Genome Size 4,637,861 bp
Protein Count 3,788
Coding Density 75.55%
GC Percentage 35.01%
Ambiguous Bases N/A
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CA_glsol027
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01920628
Country None
Date 2013-03-01
Genbank Assembly Accession GCA_000343435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,146
Refseq Category na
Seq Rel Date 2013/03/01
Spanned Gaps 0
Species Taxid 173
SSU Count 2
Submitter J. Craig Venter Institute
Taxid 1291309
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOWZ00000000.1