Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans str. Fiocruz LV4117
NCBI Strain Identifiers Fiocruz LV4117
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 130
N50 Contigs 63,995 bp
Longest Contig 313,715 bp
Scaffold Count 130
N50 Scaffolds 63,995 bp
Longest Scaffold 313,715 bp
Genome Size 4,605,596 bp
Protein Count 3,698
Coding Density 75.58%
GC Percentage 35.02%
Ambiguous Bases N/A
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CA_glsol097
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01919803
Country None
Date 2013-03-01
Genbank Assembly Accession GCA_000343145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,083
Refseq Category na
Seq Rel Date 2013/03/01
Spanned Gaps 0
Species Taxid 173
SSU Count 3
Submitter J. Craig Venter Institute
Taxid 1291365
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOVY00000000.1