Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Copenhageni; x__Leptospira interrogans serovar Copenhageni str. 2002009669
NCBI Strain Identifiers 2002009669
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 155
N50 Contigs 49,767 bp
Longest Contig 215,690 bp
Scaffold Count 155
N50 Scaffolds 49,767 bp
Longest Scaffold 215,690 bp
Genome Size 4,572,939 bp
Protein Count 3,684
Coding Density 75.84%
GC Percentage 35.01%
Ambiguous Bases N/A
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CA_glsol042
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01920624
Country None
Date 2013-03-01
Genbank Assembly Accession GCA_000343105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,049
Refseq Category na
Seq Rel Date 2013/03/01
Spanned Gaps 0
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1291318
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOWS00000000.1