Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Szwajizak; x__Leptospira interrogans serovar Szwajizak str. Szwajizak
NCBI Strain Identifiers Szwajizak
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 250
N50 Contigs 31,905 bp
Longest Contig 162,296 bp
Scaffold Count 250
N50 Scaffolds 31,905 bp
Longest Scaffold 162,296 bp
Genome Size 4,879,788 bp
Protein Count 4,200
Coding Density 76.25%
GC Percentage 35.21%
Ambiguous Bases N/A
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CA_glsol201
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01919802
Country None
Date 2013-03-01
Genbank Assembly Accession GCA_000342925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,551
Refseq Category na
Seq Rel Date 2013/03/01
Spanned Gaps 0
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1291310
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOUT00000000.1